Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps53Q8CCB4 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps53Q8CCB4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps53Q8CCB4 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps53Q8CCB4 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Gm4909-201ENSMUST00000118749 794 ntBASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Gm15276-201ENSMUST00000145953 498 ntBASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Gm16296-201ENSMUST00000159905 325 ntBASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Gm9630-201ENSMUST00000178304 885 ntBASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Gm19208-201ENSMUST00000213861 912 ntBASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vps53Q8CCB4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Gm15703-201ENSMUST00000120250 880 ntBASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Gm38317-201ENSMUST00000195564 343 ntBASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Gm44967-201ENSMUST00000207047 631 ntBASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps53Q8CCB4 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms