Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.59□□□□□ -0.55
Ska3Q8C263 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.59□□□□□ -0.55
Ska3Q8C263 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ska3Q8C263 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.55
Ska3Q8C263 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.58□□□□□ -0.56
Ska3Q8C263 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.58□□□□□ -0.56
Ska3Q8C263 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.58□□□□□ -0.56
Ska3Q8C263 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.58□□□□□ -0.56
Ska3Q8C263 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ska3Q8C263 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ska3Q8C263 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ska3Q8C263 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ska3Q8C263 Gm14726-201ENSMUST00000120623 896 ntBASIC11.58□□□□□ -0.56
Ska3Q8C263 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.58□□□□□ -0.56
Ska3Q8C263 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Ska3Q8C263 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Gm28882-201ENSMUST00000185504 314 ntBASIC11.58□□□□□ -0.56
Ska3Q8C263 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.58□□□□□ -0.56
Ska3Q8C263 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ska3Q8C263 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.58□□□□□ -0.56
Ska3Q8C263 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.58□□□□□ -0.56
Ska3Q8C263 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ska3Q8C263 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ska3Q8C263 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.58□□□□□ -0.56
Ska3Q8C263 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska3Q8C263 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ska3Q8C263 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.57□□□□□ -0.56
Ska3Q8C263 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.57□□□□□ -0.56
Ska3Q8C263 Gm14723-201ENSMUST00000118686 215 ntBASIC11.57□□□□□ -0.56
Ska3Q8C263 Gm9083-201ENSMUST00000120423 819 ntBASIC11.57□□□□□ -0.56
Ska3Q8C263 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.57□□□□□ -0.56
Ska3Q8C263 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ska3Q8C263 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Gm43822-201ENSMUST00000200285 476 ntBASIC11.57□□□□□ -0.56
Ska3Q8C263 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.57□□□□□ -0.56
Ska3Q8C263 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.57□□□□□ -0.56
Ska3Q8C263 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.57□□□□□ -0.56
Ska3Q8C263 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.57□□□□□ -0.56
Ska3Q8C263 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ska3Q8C263 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Ska3Q8C263 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ska3Q8C263 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.57□□□□□ -0.56
Ska3Q8C263 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ska3Q8C263 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ska3Q8C263 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ska3Q8C263 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ska3Q8C263 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ska3Q8C263 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ska3Q8C263 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms