Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rd3Q8BRE0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Gm13035-201ENSMUST00000117496 342 ntBASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Gm23119-201ENSMUST00000158610 140 ntBASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Gm19459-201ENSMUST00000176240 835 ntBASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Gm45770-201ENSMUST00000212105 616 ntBASIC13.01□□□□□ -0.33
Rd3Q8BRE0 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Gm1821-202ENSMUST00000227415 750 ntBASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Gm5455-201ENSMUST00000058710 715 ntBASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rd3Q8BRE0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13□□□□□ -0.33
Rd3Q8BRE0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rd3Q8BRE0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13□□□□□ -0.33
Rd3Q8BRE0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Rd3Q8BRE0 Gm13812-201ENSMUST00000118061 1347 ntBASIC13□□□□□ -0.33
Rd3Q8BRE0 Gm13810-201ENSMUST00000118584 1347 ntBASIC13□□□□□ -0.33
Rd3Q8BRE0 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rd3Q8BRE0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13□□□□□ -0.33
Rd3Q8BRE0 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Rd3Q8BRE0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13□□□□□ -0.33
Rd3Q8BRE0 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rd3Q8BRE0 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13□□□□□ -0.33
Rd3Q8BRE0 Mir7032-201ENSMUST00000185154 79 ntBASIC13□□□□□ -0.33
Rd3Q8BRE0 Gm7467-201ENSMUST00000185173 652 ntBASIC13□□□□□ -0.33
Rd3Q8BRE0 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13□□□□□ -0.33
Rd3Q8BRE0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms