Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Smim12Q78RX3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim12Q78RX3 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Smim12Q78RX3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim12Q78RX3 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim12Q78RX3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim12Q78RX3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.36□□□□□ -0.75
Smim12Q78RX3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim12Q78RX3 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim12Q78RX3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim12Q78RX3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim12Q78RX3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.36□□□□□ -0.75
Smim12Q78RX3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim12Q78RX3 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Smim12Q78RX3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.36□□□□□ -0.75
Smim12Q78RX3 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim12Q78RX3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim12Q78RX3 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.36□□□□□ -0.75
Smim12Q78RX3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Smim12Q78RX3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.35□□□□□ -0.75
Smim12Q78RX3 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.35□□□□□ -0.75
Smim12Q78RX3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Gm45925-201ENSMUST00000218882 744 ntBASIC10.35□□□□□ -0.75
Smim12Q78RX3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.35□□□□□ -0.75
Smim12Q78RX3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim12Q78RX3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.34□□□□□ -0.75
Smim12Q78RX3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Gm42693-201ENSMUST00000196779 631 ntBASIC10.34□□□□□ -0.75
Smim12Q78RX3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Smim12Q78RX3 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.34□□□□□ -0.75
Smim12Q78RX3 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.34□□□□□ -0.75
Smim12Q78RX3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim12Q78RX3 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms