Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rif1Q6PR54 Gm5507-201ENSMUST00000091897 1008 ntBASIC10.41□□□□□ -0.74
Rif1Q6PR54 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Gm23132-201ENSMUST00000104254 132 ntBASIC10.4□□□□□ -0.74
Rif1Q6PR54 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Gm11619-201ENSMUST00000117474 237 ntBASIC10.4□□□□□ -0.74
Rif1Q6PR54 Gm15004-201ENSMUST00000119192 630 ntBASIC10.4□□□□□ -0.74
Rif1Q6PR54 Gm14942-201ENSMUST00000119642 336 ntBASIC10.4□□□□□ -0.74
Rif1Q6PR54 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Kif4-ps-202ENSMUST00000185083 652 ntBASIC10.4□□□□□ -0.74
Rif1Q6PR54 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC10.4□□□□□ -0.74
Rif1Q6PR54 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.4□□□□□ -0.74
Rif1Q6PR54 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.4□□□□□ -0.74
Rif1Q6PR54 Gm18968-201ENSMUST00000221319 862 ntBASIC10.4□□□□□ -0.74
Rif1Q6PR54 CT571271.1-201ENSMUST00000227071 670 ntBASIC10.4□□□□□ -0.74
Rif1Q6PR54 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rif1Q6PR54 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.75
Rif1Q6PR54 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rif1Q6PR54 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rif1Q6PR54 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC10.4□□□□□ -0.75
Rif1Q6PR54 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rif1Q6PR54 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rif1Q6PR54 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.4□□□□□ -0.75
Rif1Q6PR54 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.75
Rif1Q6PR54 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Gm12453-201ENSMUST00000121981 331 ntBASIC10.39□□□□□ -0.75
Rif1Q6PR54 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Gm25554-201ENSMUST00000158075 113 ntBASIC10.39□□□□□ -0.75
Rif1Q6PR54 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Gm43186-201ENSMUST00000198130 824 ntBASIC10.39□□□□□ -0.75
Rif1Q6PR54 Wbp1-209ENSMUST00000205023 716 ntBASIC10.39□□□□□ -0.75
Rif1Q6PR54 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC10.39□□□□□ -0.75
Rif1Q6PR54 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Gm3551-201ENSMUST00000190750 664 ntBASIC10.39□□□□□ -0.75
Rif1Q6PR54 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.39□□□□□ -0.75
Rif1Q6PR54 AC174797.2-201ENSMUST00000225835 165 ntBASIC10.39□□□□□ -0.75
Rif1Q6PR54 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Gm6564-201ENSMUST00000075377 619 ntBASIC10.39□□□□□ -0.75
Rif1Q6PR54 Gm10288-201ENSMUST00000084614 537 ntBASIC10.39□□□□□ -0.75
Rif1Q6PR54 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rif1Q6PR54 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rif1Q6PR54 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC10.38□□□□□ -0.75
Rif1Q6PR54 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rif1Q6PR54 Gm7069-201ENSMUST00000182418 1008 ntBASIC10.38□□□□□ -0.75
Rif1Q6PR54 Mir7088-201ENSMUST00000184227 86 ntBASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms