Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.33□□□□□ -0.76
SspnQ62147 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
SspnQ62147 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SspnQ62147 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SspnQ62147 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
SspnQ62147 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
SspnQ62147 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.32□□□□□ -0.76
SspnQ62147 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.32□□□□□ -0.76
SspnQ62147 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SspnQ62147 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SspnQ62147 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
SspnQ62147 Gm1335-201ENSMUST00000121653 386 ntBASIC10.32□□□□□ -0.76
SspnQ62147 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.32□□□□□ -0.76
SspnQ62147 Rmrp-201ENSMUST00000157463 271 ntBASIC10.32□□□□□ -0.76
SspnQ62147 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
SspnQ62147 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.32□□□□□ -0.76
SspnQ62147 Gm19184-201ENSMUST00000196798 928 ntBASIC10.32□□□□□ -0.76
SspnQ62147 Gm43818-201ENSMUST00000200605 466 ntBASIC10.32□□□□□ -0.76
SspnQ62147 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.32□□□□□ -0.76
SspnQ62147 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
SspnQ62147 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.32□□□□□ -0.76
SspnQ62147 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.32□□□□□ -0.76
SspnQ62147 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.32□□□□□ -0.76
SspnQ62147 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.32□□□□□ -0.76
SspnQ62147 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SspnQ62147 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.32□□□□□ -0.76
SspnQ62147 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SspnQ62147 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SspnQ62147 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SspnQ62147 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SspnQ62147 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
SspnQ62147 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
SspnQ62147 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SspnQ62147 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SspnQ62147 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.31□□□□□ -0.76
SspnQ62147 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SspnQ62147 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SspnQ62147 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.31□□□□□ -0.76
SspnQ62147 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SspnQ62147 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SspnQ62147 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SspnQ62147 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
SspnQ62147 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.31□□□□□ -0.76
SspnQ62147 Gm13492-201ENSMUST00000119772 665 ntBASIC10.31□□□□□ -0.76
SspnQ62147 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.31□□□□□ -0.76
SspnQ62147 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SspnQ62147 Gm16296-201ENSMUST00000159905 325 ntBASIC10.31□□□□□ -0.76
SspnQ62147 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
SspnQ62147 Gm44124-201ENSMUST00000204159 472 ntBASIC10.31□□□□□ -0.76
SspnQ62147 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.31□□□□□ -0.76
SspnQ62147 Gm40466-201ENSMUST00000212174 422 ntBASIC10.31□□□□□ -0.76
SspnQ62147 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.31□□□□□ -0.76
SspnQ62147 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SspnQ62147 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SspnQ62147 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SspnQ62147 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.31□□□□□ -0.76
SspnQ62147 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SspnQ62147 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.31□□□□□ -0.76
SspnQ62147 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
SspnQ62147 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
SspnQ62147 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SspnQ62147 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
SspnQ62147 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SspnQ62147 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SspnQ62147 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SspnQ62147 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SspnQ62147 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms