Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Gm13342-201ENSMUST00000121055 207 ntBASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Gm27023-201ENSMUST00000182372 285 ntBASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Gm44882-201ENSMUST00000205702 802 ntBASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5d-4Q5R1F6 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Gm5187-201ENSMUST00000117317 991 ntBASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Gm13875-201ENSMUST00000120162 282 ntBASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Gm23119-201ENSMUST00000158610 140 ntBASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Gm27390-201ENSMUST00000184516 176 ntBASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Gm37201-201ENSMUST00000191845 523 ntBASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Gm44958-201ENSMUST00000203734 736 ntBASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Gm45880-201ENSMUST00000213041 853 ntBASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms