Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Gm25076-201ENSMUST00000104098 132 ntBASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Mir8093-201ENSMUST00000185043 137 ntBASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Gm16071-201ENSMUST00000119589 793 ntBASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Gm25072-201ENSMUST00000175233 235 ntBASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Gm23153-201ENSMUST00000175323 313 ntBASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Gm17826-201ENSMUST00000189720 798 ntBASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpm3Q5F4S9 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Gm15725-201ENSMUST00000119947 1090 ntBASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Gm4726-201ENSMUST00000135604 736 ntBASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Gm6019-201ENSMUST00000148369 736 ntBASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Gm43760-201ENSMUST00000202120 3015 ntBASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Gm3765-201ENSMUST00000130985 1447 ntBASIC15.28■□□□□ 0.04
Trpm3Q5F4S9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 Gm14314-201ENSMUST00000118225 1015 ntBASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 Gm38089-201ENSMUST00000193585 1514 ntBASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 Gm45199-201ENSMUST00000207640 1507 ntBASIC15.27■□□□□ 0.04
Trpm3Q5F4S9 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trpm3Q5F4S9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trpm3Q5F4S9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC15.27■□□□□ 0.03
Trpm3Q5F4S9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trpm3Q5F4S9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trpm3Q5F4S9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trpm3Q5F4S9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trpm3Q5F4S9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trpm3Q5F4S9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trpm3Q5F4S9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trpm3Q5F4S9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.27■□□□□ 0.03
Trpm3Q5F4S9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trpm3Q5F4S9 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Trpm3Q5F4S9 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trpm3Q5F4S9 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpm3Q5F4S9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpm3Q5F4S9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trpm3Q5F4S9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpm3Q5F4S9 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms