Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Gm13316-201ENSMUST00000140537 691 ntBASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.56□□□□□ -0.56
Brf2Q3UAW9 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Brf2Q3UAW9 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Gm13875-201ENSMUST00000120162 282 ntBASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Gm13570-201ENSMUST00000140763 309 ntBASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.55□□□□□ -0.56
Brf2Q3UAW9 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.55□□□□□ -0.56
Brf2Q3UAW9 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.55□□□□□ -0.56
Brf2Q3UAW9 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.55□□□□□ -0.56
Brf2Q3UAW9 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.55□□□□□ -0.56
Brf2Q3UAW9 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms