Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.09□□□□□ -0.47
Sox4Q06831 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.09□□□□□ -0.47
Sox4Q06831 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.09□□□□□ -0.47
Sox4Q06831 Gm44882-201ENSMUST00000205702 802 ntBASIC12.09□□□□□ -0.47
Sox4Q06831 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.09□□□□□ -0.47
Sox4Q06831 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox4Q06831 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.09□□□□□ -0.47
Sox4Q06831 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox4Q06831 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sox4Q06831 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.09□□□□□ -0.47
Sox4Q06831 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox4Q06831 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox4Q06831 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox4Q06831 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox4Q06831 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox4Q06831 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox4Q06831 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox4Q06831 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sox4Q06831 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.09□□□□□ -0.47
Sox4Q06831 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox4Q06831 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sox4Q06831 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox4Q06831 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.09□□□□□ -0.47
Sox4Q06831 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox4Q06831 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox4Q06831 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox4Q06831 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox4Q06831 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox4Q06831 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sox4Q06831 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox4Q06831 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox4Q06831 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox4Q06831 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox4Q06831 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox4Q06831 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.08□□□□□ -0.48
Sox4Q06831 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox4Q06831 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox4Q06831 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sox4Q06831 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.08□□□□□ -0.48
Sox4Q06831 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox4Q06831 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.08□□□□□ -0.48
Sox4Q06831 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.08□□□□□ -0.48
Sox4Q06831 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.08□□□□□ -0.48
Sox4Q06831 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sox4Q06831 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.08□□□□□ -0.48
Sox4Q06831 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.08□□□□□ -0.48
Sox4Q06831 Gm44651-201ENSMUST00000207343 372 ntBASIC12.08□□□□□ -0.48
Sox4Q06831 Gm45224-201ENSMUST00000208203 414 ntBASIC12.08□□□□□ -0.48
Sox4Q06831 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.08□□□□□ -0.48
Sox4Q06831 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.08□□□□□ -0.48
Sox4Q06831 Gm19994-201ENSMUST00000217086 586 ntBASIC12.08□□□□□ -0.48
Sox4Q06831 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.08□□□□□ -0.48
Sox4Q06831 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox4Q06831 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox4Q06831 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox4Q06831 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sox4Q06831 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox4Q06831 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Sox4Q06831 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.08□□□□□ -0.48
Sox4Q06831 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox4Q06831 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox4Q06831 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox4Q06831 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sox4Q06831 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sox4Q06831 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Sox4Q06831 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sox4Q06831 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.07□□□□□ -0.48
Sox4Q06831 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sox4Q06831 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sox4Q06831 Gm14644-201ENSMUST00000116671 647 ntBASIC12.07□□□□□ -0.48
Sox4Q06831 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sox4Q06831 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.07□□□□□ -0.48
Sox4Q06831 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox4Q06831 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.07□□□□□ -0.48
Sox4Q06831 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.07□□□□□ -0.48
Sox4Q06831 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.07□□□□□ -0.48
Sox4Q06831 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox4Q06831 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.07□□□□□ -0.48
Sox4Q06831 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Cog3-203ENSMUST00000227473 4197 ntBASIC12.07□□□□□ -0.48
Sox4Q06831 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox4Q06831 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms