Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col1a2Q01149 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Col1a2Q01149 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col1a2Q01149 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col1a2Q01149 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Col1a2Q01149 Gm21998-201ENSMUST00000117552 1308 ntBASIC15.28■□□□□ 0.04
Col1a2Q01149 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col1a2Q01149 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
Col1a2Q01149 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col1a2Q01149 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col1a2Q01149 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col1a2Q01149 Gm12579-201ENSMUST00000118040 783 ntBASIC15.27■□□□□ 0.04
Col1a2Q01149 Gm13263-201ENSMUST00000121271 838 ntBASIC15.27■□□□□ 0.04
Col1a2Q01149 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC15.27■□□□□ 0.04
Col1a2Q01149 Gm5714-201ENSMUST00000197343 566 ntBASIC15.27■□□□□ 0.04
Col1a2Q01149 Gm44126-201ENSMUST00000204831 514 ntBASIC15.27■□□□□ 0.04
Col1a2Q01149 Gm8285-201ENSMUST00000208293 759 ntBASIC15.27■□□□□ 0.04
Col1a2Q01149 AC154849.4-201ENSMUST00000224868 365 ntBASIC15.27■□□□□ 0.04
Col1a2Q01149 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col1a2Q01149 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col1a2Q01149 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col1a2Q01149 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col1a2Q01149 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col1a2Q01149 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col1a2Q01149 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col1a2Q01149 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col1a2Q01149 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col1a2Q01149 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col1a2Q01149 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.27■□□□□ 0.03
Col1a2Q01149 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col1a2Q01149 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col1a2Q01149 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col1a2Q01149 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Col1a2Q01149 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col1a2Q01149 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col1a2Q01149 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Col1a2Q01149 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col1a2Q01149 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.27■□□□□ 0.03
Col1a2Q01149 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.27■□□□□ 0.03
Col1a2Q01149 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col1a2Q01149 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Col1a2Q01149 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC15.26■□□□□ 0.03
Col1a2Q01149 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.26■□□□□ 0.03
Col1a2Q01149 Gm38117-201ENSMUST00000194653 939 ntBASIC15.26■□□□□ 0.03
Col1a2Q01149 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC15.26■□□□□ 0.03
Col1a2Q01149 Gm10109-202ENSMUST00000206890 1211 ntBASIC15.26■□□□□ 0.03
Col1a2Q01149 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC15.26■□□□□ 0.03
Col1a2Q01149 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Col1a2Q01149 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col1a2Q01149 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Col1a2Q01149 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col1a2Q01149 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Col1a2Q01149 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col1a2Q01149 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC15.26■□□□□ 0.03
Col1a2Q01149 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.26■□□□□ 0.03
Col1a2Q01149 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col1a2Q01149 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col1a2Q01149 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col1a2Q01149 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC15.25■□□□□ 0.03
Col1a2Q01149 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col1a2Q01149 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Col1a2Q01149 Gm8815-201ENSMUST00000173809 620 ntBASIC15.25■□□□□ 0.03
Col1a2Q01149 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Col1a2Q01149 Gm4797-201ENSMUST00000219075 1283 ntBASIC15.25■□□□□ 0.03
Col1a2Q01149 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC15.25■□□□□ 0.03
Col1a2Q01149 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Col1a2Q01149 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col1a2Q01149 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC15.25■□□□□ 0.03
Col1a2Q01149 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col1a2Q01149 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col1a2Q01149 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col1a2Q01149 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.25■□□□□ 0.03
Col1a2Q01149 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col1a2Q01149 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col1a2Q01149 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col1a2Q01149 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col1a2Q01149 Gm14132-201ENSMUST00000117188 1719 ntBASIC15.25■□□□□ 0.03
Col1a2Q01149 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col1a2Q01149 Map1b-203ENSMUST00000223725 2669 ntBASIC15.25■□□□□ 0.03
Col1a2Q01149 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Col1a2Q01149 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms