Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
GabpaQ00422 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GabpaQ00422 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
GabpaQ00422 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
GabpaQ00422 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
GabpaQ00422 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.91□□□□□ -0.18
GabpaQ00422 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.91□□□□□ -0.18
GabpaQ00422 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
GabpaQ00422 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.91□□□□□ -0.18
GabpaQ00422 Gm43184-201ENSMUST00000197247 542 ntBASIC13.91□□□□□ -0.18
GabpaQ00422 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.91□□□□□ -0.18
GabpaQ00422 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.91□□□□□ -0.18
GabpaQ00422 Gm4157-201ENSMUST00000211647 679 ntBASIC13.91□□□□□ -0.18
GabpaQ00422 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
GabpaQ00422 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
GabpaQ00422 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GabpaQ00422 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
GabpaQ00422 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.91□□□□□ -0.18
GabpaQ00422 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.9□□□□□ -0.18
GabpaQ00422 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.9□□□□□ -0.18
GabpaQ00422 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
GabpaQ00422 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.9□□□□□ -0.18
GabpaQ00422 Gm23912-201ENSMUST00000104687 87 ntBASIC13.9□□□□□ -0.18
GabpaQ00422 Gm12165-201ENSMUST00000117047 342 ntBASIC13.9□□□□□ -0.18
GabpaQ00422 Gm12501-201ENSMUST00000119163 529 ntBASIC13.9□□□□□ -0.18
GabpaQ00422 Gm13408-201ENSMUST00000119822 798 ntBASIC13.9□□□□□ -0.18
GabpaQ00422 Gm13935-201ENSMUST00000121859 798 ntBASIC13.9□□□□□ -0.18
GabpaQ00422 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
GabpaQ00422 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
GabpaQ00422 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.9□□□□□ -0.18
GabpaQ00422 Gm807-202ENSMUST00000224929 408 ntBASIC13.9□□□□□ -0.18
GabpaQ00422 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.9□□□□□ -0.18
GabpaQ00422 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 Ntng1-201ENSMUST00000051253 327 ntBASIC13.9□□□□□ -0.18
GabpaQ00422 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
GabpaQ00422 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.9□□□□□ -0.18
GabpaQ00422 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.9□□□□□ -0.18
GabpaQ00422 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GabpaQ00422 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
GabpaQ00422 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
GabpaQ00422 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
GabpaQ00422 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
GabpaQ00422 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GabpaQ00422 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GabpaQ00422 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
GabpaQ00422 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GabpaQ00422 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.89□□□□□ -0.19
GabpaQ00422 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GabpaQ00422 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GabpaQ00422 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GabpaQ00422 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.89□□□□□ -0.19
GabpaQ00422 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GabpaQ00422 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GabpaQ00422 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GabpaQ00422 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GabpaQ00422 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.89□□□□□ -0.19
GabpaQ00422 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GabpaQ00422 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
GabpaQ00422 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GabpaQ00422 Gm9630-201ENSMUST00000178304 885 ntBASIC13.89□□□□□ -0.19
GabpaQ00422 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.89□□□□□ -0.19
GabpaQ00422 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.89□□□□□ -0.19
GabpaQ00422 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms