Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Gm12015-201ENSMUST00000117065 843 ntBASIC11.65□□□□□ -0.54
Nkx3-2P97503 Gm14999-201ENSMUST00000121039 624 ntBASIC11.65□□□□□ -0.54
Nkx3-2P97503 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Gm13570-201ENSMUST00000140763 309 ntBASIC11.65□□□□□ -0.54
Nkx3-2P97503 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.65□□□□□ -0.54
Nkx3-2P97503 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Gm5363-201ENSMUST00000211927 938 ntBASIC11.65□□□□□ -0.54
Nkx3-2P97503 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx3-2P97503 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkx3-2P97503 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.65□□□□□ -0.55
Nkx3-2P97503 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkx3-2P97503 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkx3-2P97503 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Nkx3-2P97503 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkx3-2P97503 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkx3-2P97503 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkx3-2P97503 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.64□□□□□ -0.55
Nkx3-2P97503 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Gm12997-201ENSMUST00000120207 640 ntBASIC11.64□□□□□ -0.55
Nkx3-2P97503 Gm13315-201ENSMUST00000120376 991 ntBASIC11.64□□□□□ -0.55
Nkx3-2P97503 Gm14832-201ENSMUST00000121289 322 ntBASIC11.64□□□□□ -0.55
Nkx3-2P97503 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Gm10076-201ENSMUST00000073238 384 ntBASIC11.64□□□□□ -0.55
Nkx3-2P97503 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nkx3-2P97503 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.63□□□□□ -0.55
Nkx3-2P97503 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms