Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Nkx2-3P97334 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-3P97334 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-3P97334 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.36■□□□□ 0.05
Nkx2-3P97334 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Nkx2-3P97334 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-3P97334 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC15.35■□□□□ 0.05
Nkx2-3P97334 Gm9630-201ENSMUST00000178304 885 ntBASIC15.35■□□□□ 0.05
Nkx2-3P97334 Gm23771-201ENSMUST00000178702 110 ntBASIC15.35■□□□□ 0.05
Nkx2-3P97334 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Gm43186-201ENSMUST00000198130 824 ntBASIC15.35■□□□□ 0.05
Nkx2-3P97334 Gm43830-201ENSMUST00000198760 1067 ntBASIC15.35■□□□□ 0.05
Nkx2-3P97334 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-3P97334 AC132901.1-201ENSMUST00000224345 508 ntBASIC15.35■□□□□ 0.05
Nkx2-3P97334 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.35■□□□□ 0.05
Nkx2-3P97334 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.35■□□□□ 0.05
Nkx2-3P97334 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC15.35■□□□□ 0.05
Nkx2-3P97334 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-3P97334 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-3P97334 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-3P97334 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.34■□□□□ 0.05
Nkx2-3P97334 Gm5780-201ENSMUST00000217774 1834 ntBASIC15.34■□□□□ 0.05
Nkx2-3P97334 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-3P97334 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-3P97334 AC129931.1-201ENSMUST00000228865 1861 ntBASIC15.34■□□□□ 0.05
Nkx2-3P97334 Gm22920-201ENSMUST00000102175 109 ntBASIC15.34■□□□□ 0.05
Nkx2-3P97334 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Gm14193-201ENSMUST00000105067 153 ntBASIC15.34■□□□□ 0.05
Nkx2-3P97334 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Gm11836-201ENSMUST00000121022 441 ntBASIC15.34■□□□□ 0.05
Nkx2-3P97334 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Nkx2-3P97334 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Gm27910-201ENSMUST00000185004 107 ntBASIC15.34■□□□□ 0.05
Nkx2-3P97334 Gm45550-201ENSMUST00000209380 946 ntBASIC15.34■□□□□ 0.05
Nkx2-3P97334 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Gm8155-201ENSMUST00000216363 1612 ntBASIC15.34■□□□□ 0.05
Nkx2-3P97334 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Gm18983-201ENSMUST00000222884 2729 ntBASIC15.34■□□□□ 0.05
Nkx2-3P97334 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-3P97334 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.34■□□□□ 0.05
Nkx2-3P97334 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-3P97334 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Nkx2-3P97334 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nkx2-3P97334 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nkx2-3P97334 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nkx2-3P97334 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Nkx2-3P97334 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Gm25116-201ENSMUST00000157191 122 ntBASIC15.33■□□□□ 0.04
Nkx2-3P97334 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC15.33■□□□□ 0.04
Nkx2-3P97334 Gm34023-201ENSMUST00000195539 217 ntBASIC15.33■□□□□ 0.04
Nkx2-3P97334 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Gm44980-201ENSMUST00000205826 314 ntBASIC15.33■□□□□ 0.04
Nkx2-3P97334 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC15.33■□□□□ 0.04
Nkx2-3P97334 AC122408.1-201ENSMUST00000218949 218 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms