Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim43cP86449 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim43cP86449 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim43cP86449 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim43cP86449 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim43cP86449 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Trim43cP86449 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trim43cP86449 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim43cP86449 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim43cP86449 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim43cP86449 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.36□□□□□ -0.27
Trim43cP86449 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim43cP86449 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Gm9996-201ENSMUST00000070359 913 ntBASIC13.36□□□□□ -0.27
Trim43cP86449 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim43cP86449 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.36□□□□□ -0.27
Trim43cP86449 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trim43cP86449 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim43cP86449 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim43cP86449 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43cP86449 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.35□□□□□ -0.27
Trim43cP86449 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.35□□□□□ -0.27
Trim43cP86449 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim43cP86449 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim43cP86449 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Trim43cP86449 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trim43cP86449 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim43cP86449 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim43cP86449 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim43cP86449 Gm45331-201ENSMUST00000209868 554 ntBASIC13.35□□□□□ -0.27
Trim43cP86449 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim43cP86449 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.35□□□□□ -0.27
Trim43cP86449 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.35□□□□□ -0.27
Trim43cP86449 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim43cP86449 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim43cP86449 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43cP86449 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim43cP86449 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.34□□□□□ -0.27
Trim43cP86449 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.34□□□□□ -0.27
Trim43cP86449 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim43cP86449 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trim43cP86449 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms