Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Rps28P62858 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC7.03□□□□□ -1.28
Rps28P62858 AC122197.2-201ENSMUST00000219196 1635 ntBASIC7.03□□□□□ -1.28
Rps28P62858 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
Rps28P62858 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC7.03□□□□□ -1.28
Rps28P62858 Gm5638-201ENSMUST00000118618 1258 ntBASIC7.03□□□□□ -1.28
Rps28P62858 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
Rps28P62858 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC7.03□□□□□ -1.28
Rps28P62858 Gm10499-201ENSMUST00000174094 934 ntBASIC7.03□□□□□ -1.28
Rps28P62858 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Rps28P62858 Gm43566-201ENSMUST00000196851 808 ntBASIC7.03□□□□□ -1.28
Rps28P62858 Gm44608-201ENSMUST00000206827 855 ntBASIC7.03□□□□□ -1.28
Rps28P62858 Gm45328-201ENSMUST00000210942 917 ntBASIC7.03□□□□□ -1.28
Rps28P62858 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Rps28P62858 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Gm7461-201ENSMUST00000058918 827 ntBASIC7.03□□□□□ -1.28
Rps28P62858 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC7.03□□□□□ -1.28
Rps28P62858 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Rps28P62858 Fam110b-202ENSMUST00000108380 3119 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Cmah-201ENSMUST00000050859 2444 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Rps28P62858 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Rps28P62858 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Rpl7l1-201ENSMUST00000078286 2606 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
Rps28P62858 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Rps28P62858 C2-205ENSMUST00000148431 1946 ntTSL 5 BASIC7.03□□□□□ -1.28
Rps28P62858 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Slc28a2-202ENSMUST00000110524 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Msh4-203ENSMUST00000188338 2802 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
Rps28P62858 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Ddr2-201ENSMUST00000027985 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Atp6v1h-205ENSMUST00000192847 1662 ntTSL 5 BASIC7.03□□□□□ -1.28
Rps28P62858 Prox2-201ENSMUST00000110249 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Sorbs2-228ENSMUST00000153798 2667 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Cyp1a1-202ENSMUST00000216433 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 Fgd1-202ENSMUST00000112685 3240 ntTSL 5 BASIC7.03□□□□□ -1.28
Rps28P62858 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rps28P62858 AC158779.1-201ENSMUST00000228912 3861 ntBASIC7.02□□□□□ -1.28
Rps28P62858 Pard3b-201ENSMUST00000046673 3426 ntTSL 5 BASIC7.02□□□□□ -1.28
Rps28P62858 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.28
Rps28P62858 Bag6-211ENSMUST00000173550 3536 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Rps28P62858 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Tyw3-201ENSMUST00000052774 4490 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 AC154828.1-201ENSMUST00000220696 2810 ntBASIC7.02□□□□□ -1.29
Rps28P62858 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC7.02□□□□□ -1.29
Rps28P62858 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC7.02□□□□□ -1.29
Rps28P62858 Mgat4a-202ENSMUST00000143636 1802 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Ms4a6c-201ENSMUST00000165310 1841 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Gm44629-201ENSMUST00000206951 1840 ntBASIC7.02□□□□□ -1.29
Rps28P62858 Ces2b-201ENSMUST00000059449 3408 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC7.02□□□□□ -1.29
Rps28P62858 Gm10420-201ENSMUST00000121713 882 ntBASIC7.02□□□□□ -1.29
Rps28P62858 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC7.02□□□□□ -1.29
Rps28P62858 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Rps28P62858 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC7.02□□□□□ -1.29
Rps28P62858 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Gm10576-201ENSMUST00000191927 825 ntBASIC7.02□□□□□ -1.29
Rps28P62858 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC7.02□□□□□ -1.29
Rps28P62858 Gm42833-201ENSMUST00000196019 2124 ntBASIC7.02□□□□□ -1.29
Rps28P62858 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Gm44430-201ENSMUST00000203376 995 ntBASIC7.02□□□□□ -1.29
Rps28P62858 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 AC122197.1-201ENSMUST00000220281 2142 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC7.02□□□□□ -1.29
Rps28P62858 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Rps28P62858 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Rps28P62858 Adamts13-202ENSMUST00000102891 4506 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Eml1-202ENSMUST00000109857 2627 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms