Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm2P58774 Gm13813-201ENSMUST00000120998 787 ntBASIC14.12□□□□□ -0.15
Tpm2P58774 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm2P58774 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Tpm2P58774 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.12□□□□□ -0.15
Tpm2P58774 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.12□□□□□ -0.15
Tpm2P58774 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.12□□□□□ -0.15
Tpm2P58774 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.12□□□□□ -0.15
Tpm2P58774 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm2P58774 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm2P58774 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm2P58774 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm2P58774 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Tpm2P58774 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm2P58774 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm2P58774 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm2P58774 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm2P58774 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm2P58774 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm2P58774 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC14.12□□□□□ -0.15
Tpm2P58774 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm2P58774 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC14.11□□□□□ -0.15
Tpm2P58774 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Tpm2P58774 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Cog3-203ENSMUST00000227473 4197 ntBASIC14.11□□□□□ -0.15
Tpm2P58774 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.11□□□□□ -0.15
Tpm2P58774 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tpm2P58774 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.11□□□□□ -0.15
Tpm2P58774 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.11□□□□□ -0.15
Tpm2P58774 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tpm2P58774 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.11□□□□□ -0.15
Tpm2P58774 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.11□□□□□ -0.15
Tpm2P58774 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tpm2P58774 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Tpm2P58774 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.11□□□□□ -0.15
Tpm2P58774 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.11□□□□□ -0.15
Tpm2P58774 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.11□□□□□ -0.15
Tpm2P58774 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tpm2P58774 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm2P58774 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tpm2P58774 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Tpm2P58774 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tpm2P58774 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Tpm2P58774 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Gm9630-201ENSMUST00000178304 885 ntBASIC14.1□□□□□ -0.15
Tpm2P58774 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.1□□□□□ -0.15
Tpm2P58774 Gm10829-201ENSMUST00000202084 2988 ntBASIC14.1□□□□□ -0.15
Tpm2P58774 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.1□□□□□ -0.15
Tpm2P58774 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.1□□□□□ -0.15
Tpm2P58774 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC14.1□□□□□ -0.15
Tpm2P58774 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.1□□□□□ -0.15
Tpm2P58774 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm2P58774 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms