Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.99□□□□□ -0.33
Shmt1P50431 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Shmt1P50431 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Shmt1P50431 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.98□□□□□ -0.33
Shmt1P50431 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.98□□□□□ -0.33
Shmt1P50431 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
Shmt1P50431 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Shmt1P50431 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.98□□□□□ -0.33
Shmt1P50431 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Shmt1P50431 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Gm11989-201ENSMUST00000117240 672 ntBASIC12.98□□□□□ -0.33
Shmt1P50431 Gm11439-201ENSMUST00000118598 409 ntBASIC12.98□□□□□ -0.33
Shmt1P50431 Gm11362-201ENSMUST00000118838 850 ntBASIC12.98□□□□□ -0.33
Shmt1P50431 Gm14277-201ENSMUST00000121195 360 ntBASIC12.98□□□□□ -0.33
Shmt1P50431 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.98□□□□□ -0.33
Shmt1P50431 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Shmt1P50431 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.98□□□□□ -0.33
Shmt1P50431 Gm44124-201ENSMUST00000204159 472 ntBASIC12.98□□□□□ -0.33
Shmt1P50431 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.98□□□□□ -0.33
Shmt1P50431 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.98□□□□□ -0.33
Shmt1P50431 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.98□□□□□ -0.33
Shmt1P50431 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Shmt1P50431 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.98□□□□□ -0.33
Shmt1P50431 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.98□□□□□ -0.33
Shmt1P50431 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shmt1P50431 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Shmt1P50431 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.98□□□□□ -0.33
Shmt1P50431 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Shmt1P50431 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Shmt1P50431 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.97□□□□□ -0.33
Shmt1P50431 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.97□□□□□ -0.33
Shmt1P50431 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.97□□□□□ -0.33
Shmt1P50431 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.97□□□□□ -0.33
Shmt1P50431 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Shmt1P50431 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Shmt1P50431 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.97□□□□□ -0.33
Shmt1P50431 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Shmt1P50431 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Shmt1P50431 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shmt1P50431 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Shmt1P50431 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shmt1P50431 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shmt1P50431 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Shmt1P50431 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shmt1P50431 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shmt1P50431 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms