Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.24□□□□□ -0.45
LdlrP35951 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
LdlrP35951 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
LdlrP35951 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
LdlrP35951 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LdlrP35951 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LdlrP35951 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
LdlrP35951 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
LdlrP35951 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LdlrP35951 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.23□□□□□ -0.45
LdlrP35951 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.23□□□□□ -0.45
LdlrP35951 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.23□□□□□ -0.45
LdlrP35951 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Gm22323-201ENSMUST00000103832 109 ntBASIC12.23□□□□□ -0.45
LdlrP35951 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Gm12241-201ENSMUST00000118330 726 ntBASIC12.23□□□□□ -0.45
LdlrP35951 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.23□□□□□ -0.45
LdlrP35951 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LdlrP35951 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.23□□□□□ -0.45
LdlrP35951 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.23□□□□□ -0.45
LdlrP35951 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.23□□□□□ -0.45
LdlrP35951 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.23□□□□□ -0.45
LdlrP35951 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LdlrP35951 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.22□□□□□ -0.45
LdlrP35951 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.22□□□□□ -0.45
LdlrP35951 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
LdlrP35951 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.22□□□□□ -0.45
LdlrP35951 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.22□□□□□ -0.45
LdlrP35951 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LdlrP35951 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.22□□□□□ -0.45
LdlrP35951 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LdlrP35951 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Gm2231-201ENSMUST00000125661 612 ntBASIC12.22□□□□□ -0.45
LdlrP35951 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Gm25927-201ENSMUST00000175058 117 ntBASIC12.22□□□□□ -0.45
LdlrP35951 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.22□□□□□ -0.45
LdlrP35951 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.22□□□□□ -0.45
LdlrP35951 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.22□□□□□ -0.45
LdlrP35951 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LdlrP35951 Gm32025-201ENSMUST00000217960 307 ntBASIC12.22□□□□□ -0.45
LdlrP35951 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LdlrP35951 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LdlrP35951 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LdlrP35951 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.22□□□□□ -0.45
LdlrP35951 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LdlrP35951 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms