Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs1P35441 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Thbs1P35441 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs1P35441 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs1P35441 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs1P35441 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs1P35441 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Thbs1P35441 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.42□□□□□ -0.58
Thbs1P35441 Gm12058-201ENSMUST00000118614 437 ntBASIC11.42□□□□□ -0.58
Thbs1P35441 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.42□□□□□ -0.58
Thbs1P35441 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.42□□□□□ -0.58
Thbs1P35441 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.42□□□□□ -0.58
Thbs1P35441 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.42□□□□□ -0.58
Thbs1P35441 Gm43179-201ENSMUST00000198797 275 ntBASIC11.42□□□□□ -0.58
Thbs1P35441 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.42□□□□□ -0.58
Thbs1P35441 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.42□□□□□ -0.58
Thbs1P35441 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.42□□□□□ -0.58
Thbs1P35441 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.42□□□□□ -0.58
Thbs1P35441 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.42□□□□□ -0.58
Thbs1P35441 Gm39404-201ENSMUST00000216350 313 ntBASIC11.42□□□□□ -0.58
Thbs1P35441 AC125539.1-202ENSMUST00000226449 670 ntBASIC11.42□□□□□ -0.58
Thbs1P35441 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.42□□□□□ -0.58
Thbs1P35441 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.42□□□□□ -0.58
Thbs1P35441 Gm7399-201ENSMUST00000032395 858 ntBASIC11.42□□□□□ -0.58
Thbs1P35441 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.42□□□□□ -0.58
Thbs1P35441 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.42□□□□□ -0.58
Thbs1P35441 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Thbs1P35441 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Thbs1P35441 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.42□□□□□ -0.58
Thbs1P35441 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.42□□□□□ -0.58
Thbs1P35441 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.42□□□□□ -0.58
Thbs1P35441 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs1P35441 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.41□□□□□ -0.58
Thbs1P35441 Gm42535-201ENSMUST00000197312 1399 ntBASIC11.41□□□□□ -0.58
Thbs1P35441 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs1P35441 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs1P35441 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs1P35441 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs1P35441 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs1P35441 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs1P35441 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs1P35441 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.41□□□□□ -0.58
Thbs1P35441 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.41□□□□□ -0.58
Thbs1P35441 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs1P35441 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs1P35441 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Thbs1P35441 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Thbs1P35441 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.41□□□□□ -0.58
Thbs1P35441 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs1P35441 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs1P35441 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.41□□□□□ -0.58
Thbs1P35441 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.41□□□□□ -0.58
Thbs1P35441 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.41□□□□□ -0.58
Thbs1P35441 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.41□□□□□ -0.58
Thbs1P35441 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Thbs1P35441 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.41□□□□□ -0.58
Thbs1P35441 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.41□□□□□ -0.58
Thbs1P35441 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs1P35441 Gm28877-201ENSMUST00000191349 604 ntBASIC11.41□□□□□ -0.58
Thbs1P35441 Gm42919-201ENSMUST00000197753 1284 ntBASIC11.41□□□□□ -0.58
Thbs1P35441 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs1P35441 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Thbs1P35441 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs1P35441 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC11.41□□□□□ -0.58
Thbs1P35441 Gm6013-201ENSMUST00000212264 699 ntBASIC11.41□□□□□ -0.58
Thbs1P35441 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Thbs1P35441 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs1P35441 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs1P35441 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs1P35441 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs1P35441 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms