Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.07□□□□□ -0.16
Vcam1P29533 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vcam1P29533 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vcam1P29533 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.07□□□□□ -0.16
Vcam1P29533 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.07□□□□□ -0.16
Vcam1P29533 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcam1P29533 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.06□□□□□ -0.16
Vcam1P29533 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vcam1P29533 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vcam1P29533 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vcam1P29533 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.06□□□□□ -0.16
Vcam1P29533 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.06□□□□□ -0.16
Vcam1P29533 Mir7032-201ENSMUST00000185154 79 ntBASIC14.06□□□□□ -0.16
Vcam1P29533 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.06□□□□□ -0.16
Vcam1P29533 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Vcam1P29533 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Vcam1P29533 Gm45575-201ENSMUST00000210283 548 ntBASIC14.06□□□□□ -0.16
Vcam1P29533 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.06□□□□□ -0.16
Vcam1P29533 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.06□□□□□ -0.16
Vcam1P29533 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.06□□□□□ -0.16
Vcam1P29533 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Vcam1P29533 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Vcam1P29533 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Vcam1P29533 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Vcam1P29533 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.06□□□□□ -0.16
Vcam1P29533 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.06□□□□□ -0.16
Vcam1P29533 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcam1P29533 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.05□□□□□ -0.16
Vcam1P29533 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.05□□□□□ -0.16
Vcam1P29533 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.05□□□□□ -0.16
Vcam1P29533 Gm11667-201ENSMUST00000119828 486 ntBASIC14.05□□□□□ -0.16
Vcam1P29533 Gm11660-201ENSMUST00000120955 412 ntBASIC14.05□□□□□ -0.16
Vcam1P29533 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.05□□□□□ -0.16
Vcam1P29533 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.05□□□□□ -0.16
Vcam1P29533 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Vcam1P29533 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.05□□□□□ -0.16
Vcam1P29533 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.05□□□□□ -0.16
Vcam1P29533 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.05□□□□□ -0.16
Vcam1P29533 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.05□□□□□ -0.16
Vcam1P29533 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.05□□□□□ -0.16
Vcam1P29533 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Vcam1P29533 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Vcam1P29533 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Vcam1P29533 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vcam1P29533 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vcam1P29533 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms