Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Gm15566-201ENSMUST00000121130 590 ntBASIC13.68□□□□□ -0.22
Gjb1P28230 Gm13263-201ENSMUST00000121271 838 ntBASIC13.68□□□□□ -0.22
Gjb1P28230 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.68□□□□□ -0.22
Gjb1P28230 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gjb1P28230 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gjb1P28230 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.68□□□□□ -0.22
Gjb1P28230 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.68□□□□□ -0.22
Gjb1P28230 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Gjb1P28230 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.68□□□□□ -0.22
Gjb1P28230 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.68□□□□□ -0.22
Gjb1P28230 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.68□□□□□ -0.22
Gjb1P28230 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.68□□□□□ -0.22
Gjb1P28230 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gjb1P28230 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gjb1P28230 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Gjb1P28230 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.68□□□□□ -0.22
Gjb1P28230 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gjb1P28230 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gjb1P28230 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gjb1P28230 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gjb1P28230 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Gjb1P28230 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gjb1P28230 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gjb1P28230 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gjb1P28230 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Gjb1P28230 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Gjb1P28230 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gjb1P28230 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gjb1P28230 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.67□□□□□ -0.22
Gjb1P28230 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.67□□□□□ -0.22
Gjb1P28230 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Gjb1P28230 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.67□□□□□ -0.22
Gjb1P28230 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Gjb1P28230 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Gjb1P28230 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Gjb1P28230 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.67□□□□□ -0.22
Gjb1P28230 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Gjb1P28230 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.67□□□□□ -0.22
Gjb1P28230 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.67□□□□□ -0.22
Gjb1P28230 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.67□□□□□ -0.22
Gjb1P28230 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Gjb1P28230 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.67□□□□□ -0.22
Gjb1P28230 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.67□□□□□ -0.22
Gjb1P28230 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.67□□□□□ -0.22
Gjb1P28230 Gm18204-201ENSMUST00000209835 793 ntBASIC13.67□□□□□ -0.22
Gjb1P28230 Gm45594-201ENSMUST00000211717 241 ntBASIC13.67□□□□□ -0.22
Gjb1P28230 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.67□□□□□ -0.22
Gjb1P28230 Gm3619-201ENSMUST00000219947 775 ntBASIC13.67□□□□□ -0.22
Gjb1P28230 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.67□□□□□ -0.22
Gjb1P28230 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Gjb1P28230 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Gjb1P28230 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gjb1P28230 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Gjb1P28230 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Gjb1P28230 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Gjb1P28230 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gjb1P28230 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gjb1P28230 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gjb1P28230 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Gjb1P28230 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gjb1P28230 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.66□□□□□ -0.22
Gjb1P28230 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Gjb1P28230 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gjb1P28230 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gjb1P28230 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gjb1P28230 Gm26286-201ENSMUST00000104166 134 ntBASIC13.66□□□□□ -0.22
Gjb1P28230 Gm25063-201ENSMUST00000104666 94 ntBASIC13.66□□□□□ -0.22
Gjb1P28230 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.66□□□□□ -0.22
Gjb1P28230 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.66□□□□□ -0.22
Gjb1P28230 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC13.66□□□□□ -0.22
Gjb1P28230 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Gjb1P28230 Gm5100-201ENSMUST00000195631 589 ntBASIC13.66□□□□□ -0.22
Gjb1P28230 Gm43610-201ENSMUST00000199117 365 ntBASIC13.66□□□□□ -0.22
Gjb1P28230 Gm44158-201ENSMUST00000203881 505 ntBASIC13.66□□□□□ -0.22
Gjb1P28230 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.66□□□□□ -0.22
Gjb1P28230 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms