Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.82□□□□□ -0.68
Ccl3P10855 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Ccl3P10855 Gm11246-201ENSMUST00000120880 345 ntBASIC10.82□□□□□ -0.68
Ccl3P10855 Gm16397-201ENSMUST00000122201 494 ntBASIC10.82□□□□□ -0.68
Ccl3P10855 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC10.82□□□□□ -0.68
Ccl3P10855 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.82□□□□□ -0.68
Ccl3P10855 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ccl3P10855 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Ccl3P10855 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Ccl3P10855 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccl3P10855 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ccl3P10855 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.82□□□□□ -0.68
Ccl3P10855 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.82□□□□□ -0.68
Ccl3P10855 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl3P10855 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ccl3P10855 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ccl3P10855 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ccl3P10855 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.81□□□□□ -0.68
Ccl3P10855 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Ccl3P10855 Gm14585-201ENSMUST00000120713 634 ntBASIC10.81□□□□□ -0.68
Ccl3P10855 Gm13263-201ENSMUST00000121271 838 ntBASIC10.81□□□□□ -0.68
Ccl3P10855 Gm7666-201ENSMUST00000146631 819 ntBASIC10.81□□□□□ -0.68
Ccl3P10855 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.81□□□□□ -0.68
Ccl3P10855 Mir6958-201ENSMUST00000184207 73 ntBASIC10.81□□□□□ -0.68
Ccl3P10855 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.81□□□□□ -0.68
Ccl3P10855 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccl3P10855 Gm2517-201ENSMUST00000215651 348 ntBASIC10.81□□□□□ -0.68
Ccl3P10855 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccl3P10855 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 AC132901.1-201ENSMUST00000224345 508 ntBASIC10.81□□□□□ -0.68
Ccl3P10855 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.81□□□□□ -0.68
Ccl3P10855 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC10.81□□□□□ -0.68
Ccl3P10855 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Ccl3P10855 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Gm37912-201ENSMUST00000191895 3076 ntBASIC10.81□□□□□ -0.68
Ccl3P10855 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl3P10855 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Ccl3P10855 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ccl3P10855 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ccl3P10855 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ccl3P10855 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ccl3P10855 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ccl3P10855 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms