Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Npc1O35604 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Npc1O35604 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.01□□□□□ -0.49
Npc1O35604 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Npc1O35604 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Npc1O35604 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Npc1O35604 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Npc1O35604 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Npc1O35604 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Npc1O35604 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Npc1O35604 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Npc1O35604 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Gm15236-201ENSMUST00000117309 379 ntBASIC12□□□□□ -0.49
Npc1O35604 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12□□□□□ -0.49
Npc1O35604 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12□□□□□ -0.49
Npc1O35604 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12□□□□□ -0.49
Npc1O35604 Gm8494-201ENSMUST00000178171 1233 ntBASIC12□□□□□ -0.49
Npc1O35604 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12□□□□□ -0.49
Npc1O35604 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12□□□□□ -0.49
Npc1O35604 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12□□□□□ -0.49
Npc1O35604 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Npc1O35604 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Gm4864-201ENSMUST00000219894 1461 ntBASIC12□□□□□ -0.49
Npc1O35604 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12□□□□□ -0.49
Npc1O35604 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Npc1O35604 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npc1O35604 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Npc1O35604 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Npc1O35604 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Npc1O35604 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.99□□□□□ -0.49
Npc1O35604 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Npc1O35604 Gm8712-201ENSMUST00000221090 701 ntBASIC11.99□□□□□ -0.49
Npc1O35604 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.99□□□□□ -0.49
Npc1O35604 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.99□□□□□ -0.49
Npc1O35604 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.99□□□□□ -0.49
Npc1O35604 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Npc1O35604 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.99□□□□□ -0.49
Npc1O35604 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npc1O35604 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Npc1O35604 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Npc1O35604 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Npc1O35604 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms