Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trove2O08848 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.65□□□□□ -0.38
Trove2O08848 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trove2O08848 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trove2O08848 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.65□□□□□ -0.38
Trove2O08848 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Trove2O08848 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.65□□□□□ -0.39
Trove2O08848 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trove2O08848 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.65□□□□□ -0.39
Trove2O08848 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.64□□□□□ -0.39
Trove2O08848 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Gm11618-201ENSMUST00000117946 267 ntBASIC12.64□□□□□ -0.39
Trove2O08848 Gm13813-201ENSMUST00000120998 787 ntBASIC12.64□□□□□ -0.39
Trove2O08848 Mir1894-201ENSMUST00000122802 81 ntBASIC12.64□□□□□ -0.39
Trove2O08848 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Gm6244-201ENSMUST00000178732 841 ntBASIC12.64□□□□□ -0.39
Trove2O08848 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.64□□□□□ -0.39
Trove2O08848 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trove2O08848 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trove2O08848 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trove2O08848 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.64□□□□□ -0.39
Trove2O08848 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trove2O08848 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.64□□□□□ -0.39
Trove2O08848 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trove2O08848 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trove2O08848 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.64□□□□□ -0.39
Trove2O08848 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trove2O08848 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trove2O08848 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Trove2O08848 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trove2O08848 Gm15806-201ENSMUST00000120696 955 ntBASIC12.63□□□□□ -0.39
Trove2O08848 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.63□□□□□ -0.39
Trove2O08848 Gm27892-201ENSMUST00000185017 106 ntBASIC12.63□□□□□ -0.39
Trove2O08848 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trove2O08848 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.63□□□□□ -0.39
Trove2O08848 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.63□□□□□ -0.39
Trove2O08848 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.63□□□□□ -0.39
Trove2O08848 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trove2O08848 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trove2O08848 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trove2O08848 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trove2O08848 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Trove2O08848 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Trove2O08848 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trove2O08848 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms