Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.81□□□□□ -0.04
NpcdF8VQB8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NpcdF8VQB8 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.8□□□□□ -0.04
NpcdF8VQB8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.8□□□□□ -0.04
NpcdF8VQB8 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.8□□□□□ -0.04
NpcdF8VQB8 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Gm12948-201ENSMUST00000119406 682 ntBASIC14.8□□□□□ -0.04
NpcdF8VQB8 Gm11956-201ENSMUST00000119525 512 ntBASIC14.8□□□□□ -0.04
NpcdF8VQB8 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Gm19640-201ENSMUST00000214849 464 ntBASIC14.8□□□□□ -0.04
NpcdF8VQB8 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Mir483-201ENSMUST00000093631 73 ntBASIC14.8□□□□□ -0.04
NpcdF8VQB8 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.8□□□□□ -0.04
NpcdF8VQB8 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NpcdF8VQB8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Mir874-201ENSMUST00000104769 76 ntBASIC14.79□□□□□ -0.04
NpcdF8VQB8 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Mir6923-201ENSMUST00000184592 72 ntBASIC14.79□□□□□ -0.04
NpcdF8VQB8 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.79□□□□□ -0.04
NpcdF8VQB8 Gm43778-201ENSMUST00000199438 199 ntBASIC14.79□□□□□ -0.04
NpcdF8VQB8 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.79□□□□□ -0.04
NpcdF8VQB8 Gm45120-201ENSMUST00000208880 408 ntBASIC14.79□□□□□ -0.04
NpcdF8VQB8 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.79□□□□□ -0.04
NpcdF8VQB8 AC115122.1-201ENSMUST00000224850 1040 ntBASIC14.79□□□□□ -0.04
NpcdF8VQB8 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NpcdF8VQB8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NpcdF8VQB8 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms