Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc112A0AUP1 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc112A0AUP1 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc112A0AUP1 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc112A0AUP1 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc112A0AUP1 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc112A0AUP1 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc112A0AUP1 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Ccdc112A0AUP1 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc112A0AUP1 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc112A0AUP1 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc112A0AUP1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Gm13342-201ENSMUST00000121055 207 ntBASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc112A0AUP1 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Gm7809-201ENSMUST00000153199 742 ntBASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Gm3890-201ENSMUST00000182416 207 ntBASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Gm7653-201ENSMUST00000214567 508 ntBASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Gm39404-201ENSMUST00000216350 313 ntBASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc112A0AUP1 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Ccdc112A0AUP1 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc112A0AUP1 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14□□□□□ -0.17
Ccdc112A0AUP1 Gm13127-201ENSMUST00000118978 1389 ntBASIC14□□□□□ -0.17
Ccdc112A0AUP1 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Gm2606-201ENSMUST00000100754 1002 ntBASIC14□□□□□ -0.17
Ccdc112A0AUP1 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Gm12390-201ENSMUST00000117897 397 ntBASIC14□□□□□ -0.17
Ccdc112A0AUP1 Gm12286-201ENSMUST00000119246 1002 ntBASIC14□□□□□ -0.17
Ccdc112A0AUP1 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc112A0AUP1 Gm40466-201ENSMUST00000212174 422 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms