Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav18A0A075B656 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trav18A0A075B656 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav18A0A075B656 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.07□□□□□ -0.8
Trav18A0A075B656 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.07□□□□□ -0.8
Trav18A0A075B656 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Gm9083-201ENSMUST00000120423 819 ntBASIC10.07□□□□□ -0.8
Trav18A0A075B656 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.07□□□□□ -0.8
Trav18A0A075B656 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Gm7653-201ENSMUST00000214567 508 ntBASIC10.07□□□□□ -0.8
Trav18A0A075B656 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav18A0A075B656 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.07□□□□□ -0.8
Trav18A0A075B656 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.06□□□□□ -0.8
Trav18A0A075B656 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.06□□□□□ -0.8
Trav18A0A075B656 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Gm11478-201ENSMUST00000117851 599 ntBASIC10.06□□□□□ -0.8
Trav18A0A075B656 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Gm4034-201ENSMUST00000187674 480 ntBASIC10.06□□□□□ -0.8
Trav18A0A075B656 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav18A0A075B656 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Gm5904-201ENSMUST00000210286 865 ntBASIC10.06□□□□□ -0.8
Trav18A0A075B656 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav18A0A075B656 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.06□□□□□ -0.8
Trav18A0A075B656 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms