Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Gm24526-201ENSMUST00000082921 158 ntBASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav5-4A0A075B652 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Gm19184-201ENSMUST00000196798 928 ntBASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5-4A0A075B652 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms