Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClcnkaQ9WUB7 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Gm24231-201ENSMUST00000104315 133 ntBASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Mir1247-201ENSMUST00000116706 82 ntBASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClcnkaQ9WUB7 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Gm14760-201ENSMUST00000121831 999 ntBASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClcnkaQ9WUB7 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.35□□□□□ -0.59
ClcnkaQ9WUB7 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.35□□□□□ -0.59
ClcnkaQ9WUB7 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClcnkaQ9WUB7 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ClcnkaQ9WUB7 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClcnkaQ9WUB7 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
ClcnkaQ9WUB7 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms