Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Gm18711-201ENSMUST00000199341 750 ntBASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Gm30285-201ENSMUST00000214614 422 ntBASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Gm9996-201ENSMUST00000070359 913 ntBASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf6Q9DBU5 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Gm6621-201ENSMUST00000193251 772 ntBASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Gm21769-201ENSMUST00000211922 111 ntBASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf6Q9DBU5 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf6Q9DBU5 Gm43630-201ENSMUST00000201550 776 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms