Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Gm23363-201ENSMUST00000175024 79 ntBASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.37□□□□□ -0.59
Trim13Q9CYB0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.37□□□□□ -0.59
Trim13Q9CYB0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim13Q9CYB0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Gm15703-201ENSMUST00000120250 880 ntBASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.36□□□□□ -0.59
Trim13Q9CYB0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Gm28196-201ENSMUST00000187719 640 ntBASIC11.36□□□□□ -0.59
Trim13Q9CYB0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Gm8099-201ENSMUST00000200510 742 ntBASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.36□□□□□ -0.59
Trim13Q9CYB0 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 161.6 ms