Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.06□□□□□ -0.48
Trim16Q99PP9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.06□□□□□ -0.48
Trim16Q99PP9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Gm3890-201ENSMUST00000182416 207 ntBASIC12.06□□□□□ -0.48
Trim16Q99PP9 Gm37008-201ENSMUST00000195712 319 ntBASIC12.06□□□□□ -0.48
Trim16Q99PP9 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.06□□□□□ -0.48
Trim16Q99PP9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim16Q99PP9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.05□□□□□ -0.48
Trim16Q99PP9 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.05□□□□□ -0.48
Trim16Q99PP9 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.05□□□□□ -0.48
Trim16Q99PP9 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.05□□□□□ -0.48
Trim16Q99PP9 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.05□□□□□ -0.48
Trim16Q99PP9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim16Q99PP9 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Gm19184-201ENSMUST00000196798 928 ntBASIC12.05□□□□□ -0.48
Trim16Q99PP9 Gm18584-201ENSMUST00000203098 964 ntBASIC12.05□□□□□ -0.48
Trim16Q99PP9 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.05□□□□□ -0.48
Trim16Q99PP9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.05□□□□□ -0.48
Trim16Q99PP9 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.05□□□□□ -0.48
Trim16Q99PP9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim16Q99PP9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.04□□□□□ -0.48
Trim16Q99PP9 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Trim16Q99PP9 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms