Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Gm13809-201ENSMUST00000117921 597 ntBASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Gm11246-201ENSMUST00000120880 345 ntBASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Gm4726-201ENSMUST00000135604 736 ntBASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Gm6019-201ENSMUST00000148369 736 ntBASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Gm18304-201ENSMUST00000189162 546 ntBASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Gm37028-201ENSMUST00000194276 107 ntBASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Gm5455-201ENSMUST00000058710 715 ntBASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Snora73b-201ENSMUST00000083419 205 ntBASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx6-1Q99MA9 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Gm24934-201ENSMUST00000103764 111 ntBASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Gm27530-201ENSMUST00000184096 98 ntBASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms