Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.17□□□□□ -0.14
Rfc4Q99J62 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Gm23119-201ENSMUST00000158610 140 ntBASIC14.17□□□□□ -0.14
Rfc4Q99J62 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Gm5778-201ENSMUST00000171003 1072 ntBASIC14.17□□□□□ -0.14
Rfc4Q99J62 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Gm8100-201ENSMUST00000182906 988 ntBASIC14.17□□□□□ -0.14
Rfc4Q99J62 Gm10774-201ENSMUST00000188689 204 ntBASIC14.17□□□□□ -0.14
Rfc4Q99J62 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.17□□□□□ -0.14
Rfc4Q99J62 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.17□□□□□ -0.14
Rfc4Q99J62 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.17□□□□□ -0.14
Rfc4Q99J62 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.17□□□□□ -0.14
Rfc4Q99J62 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.17□□□□□ -0.14
Rfc4Q99J62 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.17□□□□□ -0.14
Rfc4Q99J62 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.16□□□□□ -0.14
Rfc4Q99J62 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc4Q99J62 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.16□□□□□ -0.14
Rfc4Q99J62 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rfc4Q99J62 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.16□□□□□ -0.14
Rfc4Q99J62 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc4Q99J62 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Gm4157-201ENSMUST00000211647 679 ntBASIC14.16□□□□□ -0.14
Rfc4Q99J62 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Gm10288-201ENSMUST00000084614 537 ntBASIC14.16□□□□□ -0.14
Rfc4Q99J62 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.16□□□□□ -0.14
Rfc4Q99J62 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.16□□□□□ -0.14
Rfc4Q99J62 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc4Q99J62 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.16□□□□□ -0.14
Rfc4Q99J62 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc4Q99J62 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Gm14724-201ENSMUST00000118400 537 ntBASIC14.15□□□□□ -0.14
Rfc4Q99J62 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.15□□□□□ -0.14
Rfc4Q99J62 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Gm2965-201ENSMUST00000198365 343 ntBASIC14.15□□□□□ -0.14
Rfc4Q99J62 Mir7686-201ENSMUST00000200604 57 ntBASIC14.15□□□□□ -0.14
Rfc4Q99J62 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.15□□□□□ -0.14
Rfc4Q99J62 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC14.15□□□□□ -0.14
Rfc4Q99J62 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms