Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Gm24891-201ENSMUST00000104391 136 ntBASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Gm11509-201ENSMUST00000117358 325 ntBASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Gm10051-201ENSMUST00000145209 414 ntBASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Gm5051-201ENSMUST00000204085 485 ntBASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpusd1Q8VCZ8 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Gm12164-201ENSMUST00000121695 551 ntBASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Gm8100-201ENSMUST00000182906 988 ntBASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Gm4034-201ENSMUST00000187674 480 ntBASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Gm2965-201ENSMUST00000198365 343 ntBASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Gm8956-201ENSMUST00000203939 825 ntBASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Gm6905-201ENSMUST00000205729 511 ntBASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rpusd1Q8VCZ8 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms