Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Ndc1Q8VCB1 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Ndc1Q8VCB1 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Ndc1Q8VCB1 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.65□□□□□ -0.55
Ndc1Q8VCB1 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ndc1Q8VCB1 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Rmrp-201ENSMUST00000157463 271 ntBASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Mir7070-201ENSMUST00000183657 86 ntBASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Gm28882-201ENSMUST00000185504 314 ntBASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Rps4l-202ENSMUST00000204242 789 ntBASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Gm44262-201ENSMUST00000204969 372 ntBASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Gm44651-201ENSMUST00000207343 372 ntBASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Gzmn-202ENSMUST00000225535 989 ntBASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ndc1Q8VCB1 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Gm15703-201ENSMUST00000120250 880 ntBASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Gm14277-201ENSMUST00000121195 360 ntBASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Mir5132-201ENSMUST00000175166 71 ntBASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Gm27341-201ENSMUST00000183570 106 ntBASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.63□□□□□ -0.55
Ndc1Q8VCB1 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms