Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Gm39404-201ENSMUST00000216350 313 ntBASIC11.81□□□□□ -0.52
Lsm1Q8VC85 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Gm5781-201ENSMUST00000219792 443 ntBASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.8□□□□□ -0.52
Lsm1Q8VC85 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm1Q8VC85 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms