Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Gm8410-201ENSMUST00000117225 605 ntBASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Gm27622-201ENSMUST00000183779 60 ntBASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Gm5035-201ENSMUST00000215581 927 ntBASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Dupd1-202ENSMUST00000224735 548 ntBASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Gm38089-201ENSMUST00000193585 1514 ntBASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Gm25948-201ENSMUST00000175334 112 ntBASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc9Q8VC31 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Gm14005-209ENSMUST00000224993 1832 ntBASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms