Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Gm12058-201ENSMUST00000118614 437 ntBASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Gm39404-201ENSMUST00000216350 313 ntBASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cchcr1Q8K2I2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Gm24830-201ENSMUST00000102024 166 ntBASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Gm26232-201ENSMUST00000083360 166 ntBASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Cchcr1Q8K2I2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cchcr1Q8K2I2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cchcr1Q8K2I2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cchcr1Q8K2I2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.52□□□□□ -0.08
Cchcr1Q8K2I2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cchcr1Q8K2I2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cchcr1Q8K2I2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cchcr1Q8K2I2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cchcr1Q8K2I2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cchcr1Q8K2I2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cchcr1Q8K2I2 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cchcr1Q8K2I2 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cchcr1Q8K2I2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cchcr1Q8K2I2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cchcr1Q8K2I2 Gm13226-201ENSMUST00000117838 404 ntBASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Gm14660-201ENSMUST00000119809 575 ntBASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Gm37201-201ENSMUST00000191845 523 ntBASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms