Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.04□□□□□ -0.48
Rab43Q8CG50 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.03□□□□□ -0.48
Rab43Q8CG50 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Gm14058-201ENSMUST00000116082 735 ntBASIC12.03□□□□□ -0.48
Rab43Q8CG50 Gm13035-201ENSMUST00000117496 342 ntBASIC12.03□□□□□ -0.48
Rab43Q8CG50 Gm12501-201ENSMUST00000119163 529 ntBASIC12.03□□□□□ -0.48
Rab43Q8CG50 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.03□□□□□ -0.48
Rab43Q8CG50 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.03□□□□□ -0.48
Rab43Q8CG50 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Gm21811-201ENSMUST00000096485 930 ntBASIC12.03□□□□□ -0.48
Rab43Q8CG50 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.03□□□□□ -0.48
Rab43Q8CG50 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.03□□□□□ -0.48
Rab43Q8CG50 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab43Q8CG50 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rab43Q8CG50 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rab43Q8CG50 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.02□□□□□ -0.48
Rab43Q8CG50 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rab43Q8CG50 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rab43Q8CG50 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.02□□□□□ -0.48
Rab43Q8CG50 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rab43Q8CG50 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.02□□□□□ -0.48
Rab43Q8CG50 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rab43Q8CG50 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rab43Q8CG50 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.02□□□□□ -0.49
Rab43Q8CG50 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.02□□□□□ -0.49
Rab43Q8CG50 Gm5369-201ENSMUST00000217499 588 ntBASIC12.02□□□□□ -0.49
Rab43Q8CG50 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.02□□□□□ -0.49
Rab43Q8CG50 Gm270-201ENSMUST00000223010 976 ntBASIC12.02□□□□□ -0.49
Rab43Q8CG50 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab43Q8CG50 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab43Q8CG50 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.01□□□□□ -0.49
Rab43Q8CG50 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab43Q8CG50 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rab43Q8CG50 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab43Q8CG50 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab43Q8CG50 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab43Q8CG50 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rab43Q8CG50 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab43Q8CG50 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rab43Q8CG50 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab43Q8CG50 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab43Q8CG50 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab43Q8CG50 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rab43Q8CG50 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms