Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Gm24934-201ENSMUST00000103764 111 ntBASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Gm7851-201ENSMUST00000117574 323 ntBASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Gm11511-201ENSMUST00000118146 540 ntBASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Gm45594-201ENSMUST00000211717 241 ntBASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Gm22133-201ENSMUST00000102082 109 ntBASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Gm11801-201ENSMUST00000117807 746 ntBASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Mir7076-201ENSMUST00000183519 74 ntBASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Gm19009-201ENSMUST00000223072 823 ntBASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a6Q8C6K9 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.08□□□□□ -0.63
Col6a6Q8C6K9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a6Q8C6K9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms