Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Gm12390-201ENSMUST00000117897 397 ntBASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rnf38Q8BI21 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rnf38Q8BI21 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.9□□□□□ -0.51
Rnf38Q8BI21 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rnf38Q8BI21 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.51
Rnf38Q8BI21 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Rnf38Q8BI21 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rnf38Q8BI21 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rnf38Q8BI21 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.89□□□□□ -0.51
Rnf38Q8BI21 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.89□□□□□ -0.51
Rnf38Q8BI21 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms