Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Gm8738-201ENSMUST00000172606 329 ntBASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Gm37424-201ENSMUST00000191727 561 ntBASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Gm37008-201ENSMUST00000195712 319 ntBASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn3Q8BHH8 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Gm14127-201ENSMUST00000117906 678 ntBASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Rmrp-201ENSMUST00000157463 271 ntBASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Gm9630-201ENSMUST00000178304 885 ntBASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Gm45925-201ENSMUST00000218882 744 ntBASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn3Q8BHH8 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Gm10434-201ENSMUST00000101158 471 ntBASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Gm12742-201ENSMUST00000117326 410 ntBASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Gm8018-201ENSMUST00000173536 789 ntBASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Gm6222-202ENSMUST00000182143 629 ntBASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Gm19184-201ENSMUST00000196798 928 ntBASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.6□□□□□ -0.55
Clrn3Q8BHH8 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms