Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 BC043934-202ENSMUST00000185694 2356 ntBASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Slc5a7Q8BGY9 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Gm22121-201ENSMUST00000175148 54 ntBASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Gm4034-201ENSMUST00000187674 480 ntBASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Slc5a7Q8BGY9 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Gm43514-201ENSMUST00000198852 424 ntBASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms