Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.08□□□□□ -0.48
Ccdc116Q80X53 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc116Q80X53 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc116Q80X53 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc116Q80X53 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc116Q80X53 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc116Q80X53 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc116Q80X53 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc116Q80X53 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc116Q80X53 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc116Q80X53 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc116Q80X53 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc116Q80X53 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc116Q80X53 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc116Q80X53 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Gm37008-201ENSMUST00000195712 319 ntBASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Gm18187-201ENSMUST00000196476 984 ntBASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Gm42599-201ENSMUST00000201308 469 ntBASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Gm32390-201ENSMUST00000212713 1172 ntBASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Gm10076-201ENSMUST00000073238 384 ntBASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Ccdc116Q80X53 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Gm37102-201ENSMUST00000195740 1105 ntBASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Gm44958-201ENSMUST00000203734 736 ntBASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.06□□□□□ -0.48
Ccdc116Q80X53 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc116Q80X53 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms