Protein–RNA interactions for Protein: Q80WR1

Tspan18, Tetraspanin-18, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18Q80WR1 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Gm16570-201ENSMUST00000161951 436 ntBASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Gm7003-201ENSMUST00000195089 312 ntBASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Gm18038-201ENSMUST00000197900 485 ntBASIC13.12□□□□□ -0.31
Tspan18Q80WR1 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.12□□□□□ -0.31
Tspan18Q80WR1 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Gm23949-201ENSMUST00000104027 127 ntBASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Gm26286-201ENSMUST00000104166 134 ntBASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Gm12266-201ENSMUST00000120311 962 ntBASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Gm5706-201ENSMUST00000181525 993 ntBASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Gm8343-201ENSMUST00000182705 994 ntBASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Gm27390-201ENSMUST00000184516 176 ntBASIC13.11□□□□□ -0.31
Tspan18Q80WR1 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Gm270-201ENSMUST00000223010 976 ntBASIC13.11□□□□□ -0.31
Tspan18Q80WR1 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tspan18Q80WR1 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tspan18Q80WR1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tspan18Q80WR1 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tspan18Q80WR1 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tspan18Q80WR1 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tspan18Q80WR1 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tspan18Q80WR1 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tspan18Q80WR1 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tspan18Q80WR1 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tspan18Q80WR1 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.1□□□□□ -0.31
Tspan18Q80WR1 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tspan18Q80WR1 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tspan18Q80WR1 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.1□□□□□ -0.31
Tspan18Q80WR1 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tspan18Q80WR1 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tspan18Q80WR1 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tspan18Q80WR1 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Tspan18Q80WR1 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms