Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm39288-201ENSMUST00000210554 446 ntBASIC13.14□□□□□ -0.31
ShbQ6PD21 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ShbQ6PD21 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.14□□□□□ -0.31
ShbQ6PD21 BC106175-202ENSMUST00000219344 1213 ntBASIC13.14□□□□□ -0.31
ShbQ6PD21 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
ShbQ6PD21 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.14□□□□□ -0.31
ShbQ6PD21 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.14□□□□□ -0.31
ShbQ6PD21 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.14□□□□□ -0.31
ShbQ6PD21 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
ShbQ6PD21 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ShbQ6PD21 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.13□□□□□ -0.31
ShbQ6PD21 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ShbQ6PD21 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.13□□□□□ -0.31
ShbQ6PD21 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ShbQ6PD21 Gm11619-201ENSMUST00000117474 237 ntBASIC13.13□□□□□ -0.31
ShbQ6PD21 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.13□□□□□ -0.31
ShbQ6PD21 Gm12791-201ENSMUST00000120788 655 ntBASIC13.13□□□□□ -0.31
ShbQ6PD21 Gm11244-201ENSMUST00000121243 237 ntBASIC13.13□□□□□ -0.31
ShbQ6PD21 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.13□□□□□ -0.31
ShbQ6PD21 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC13.13□□□□□ -0.31
ShbQ6PD21 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.13□□□□□ -0.31
ShbQ6PD21 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ShbQ6PD21 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ShbQ6PD21 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ShbQ6PD21 Gm17192-201ENSMUST00000169031 511 ntBASIC13.13□□□□□ -0.31
ShbQ6PD21 Gm45527-201ENSMUST00000211052 774 ntBASIC13.13□□□□□ -0.31
ShbQ6PD21 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ShbQ6PD21 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.13□□□□□ -0.31
ShbQ6PD21 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.13□□□□□ -0.31
ShbQ6PD21 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ShbQ6PD21 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.12□□□□□ -0.31
ShbQ6PD21 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
ShbQ6PD21 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.12□□□□□ -0.31
ShbQ6PD21 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.12□□□□□ -0.31
ShbQ6PD21 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 Ighv1-2-201ENSMUST00000195325 378 ntBASIC13.12□□□□□ -0.31
ShbQ6PD21 Gm43380-201ENSMUST00000200421 220 ntBASIC13.12□□□□□ -0.31
ShbQ6PD21 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ShbQ6PD21 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.12□□□□□ -0.31
ShbQ6PD21 Olfr692-202ENSMUST00000217827 1126 ntBASIC13.12□□□□□ -0.31
ShbQ6PD21 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC13.12□□□□□ -0.31
ShbQ6PD21 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
ShbQ6PD21 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms