Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.88□□□□□ -0.51
Sdc3Q64519 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.87□□□□□ -0.51
Sdc3Q64519 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.87□□□□□ -0.51
Sdc3Q64519 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Sdc3Q64519 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.87□□□□□ -0.51
Sdc3Q64519 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.87□□□□□ -0.51
Sdc3Q64519 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.87□□□□□ -0.51
Sdc3Q64519 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.87□□□□□ -0.51
Sdc3Q64519 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Sdc3Q64519 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.87□□□□□ -0.51
Sdc3Q64519 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.87□□□□□ -0.51
Sdc3Q64519 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sdc3Q64519 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.87□□□□□ -0.51
Sdc3Q64519 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.87□□□□□ -0.51
Sdc3Q64519 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sdc3Q64519 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Sdc3Q64519 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Sdc3Q64519 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Sdc3Q64519 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sdc3Q64519 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sdc3Q64519 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sdc3Q64519 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sdc3Q64519 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.86□□□□□ -0.51
Sdc3Q64519 Gm15547-201ENSMUST00000122152 333 ntBASIC11.86□□□□□ -0.51
Sdc3Q64519 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Sdc3Q64519 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.86□□□□□ -0.51
Sdc3Q64519 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Gm8712-201ENSMUST00000221090 701 ntBASIC11.86□□□□□ -0.51
Sdc3Q64519 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Sdc3Q64519 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Sdc3Q64519 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.86□□□□□ -0.51
Sdc3Q64519 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.86□□□□□ -0.51
Sdc3Q64519 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Sdc3Q64519 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.86□□□□□ -0.51
Sdc3Q64519 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.86□□□□□ -0.51
Sdc3Q64519 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sdc3Q64519 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sdc3Q64519 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Sdc3Q64519 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sdc3Q64519 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sdc3Q64519 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Sdc3Q64519 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sdc3Q64519 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sdc3Q64519 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sdc3Q64519 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sdc3Q64519 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sdc3Q64519 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sdc3Q64519 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.85□□□□□ -0.51
Sdc3Q64519 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sdc3Q64519 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sdc3Q64519 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms