Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Gm12274-201ENSMUST00000120062 385 ntBASIC11.82□□□□□ -0.52
Col12a1Q60847 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Gm4462-201ENSMUST00000166453 492 ntBASIC11.82□□□□□ -0.52
Col12a1Q60847 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.82□□□□□ -0.52
Col12a1Q60847 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.82□□□□□ -0.52
Col12a1Q60847 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Gm3150-201ENSMUST00000166418 204 ntBASIC11.82□□□□□ -0.52
Col12a1Q60847 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.82□□□□□ -0.52
Col12a1Q60847 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC11.82□□□□□ -0.52
Col12a1Q60847 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.81□□□□□ -0.52
Col12a1Q60847 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.81□□□□□ -0.52
Col12a1Q60847 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Col12a1Q60847 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.81□□□□□ -0.52
Col12a1Q60847 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Col12a1Q60847 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Col12a1Q60847 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Gm7627-201ENSMUST00000183205 999 ntBASIC11.81□□□□□ -0.52
Col12a1Q60847 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Col12a1Q60847 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Col12a1Q60847 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Col12a1Q60847 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
Col12a1Q60847 Gm15982-201ENSMUST00000121681 554 ntBASIC11.81□□□□□ -0.52
Col12a1Q60847 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Col12a1Q60847 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC11.81□□□□□ -0.52
Col12a1Q60847 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.81□□□□□ -0.52
Col12a1Q60847 Rps3a2-201ENSMUST00000074245 792 ntBASIC11.81□□□□□ -0.52
Col12a1Q60847 Rps3a3-201ENSMUST00000074680 795 ntBASIC11.81□□□□□ -0.52
Col12a1Q60847 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Col12a1Q60847 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.81□□□□□ -0.52
Col12a1Q60847 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col12a1Q60847 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col12a1Q60847 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col12a1Q60847 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Gm14395-201ENSMUST00000120494 563 ntBASIC11.8□□□□□ -0.52
Col12a1Q60847 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Gm9081-201ENSMUST00000182346 991 ntBASIC11.8□□□□□ -0.52
Col12a1Q60847 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col12a1Q60847 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.8□□□□□ -0.52
Col12a1Q60847 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.8□□□□□ -0.52
Col12a1Q60847 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.8□□□□□ -0.52
Col12a1Q60847 Gm8181-201ENSMUST00000062242 669 ntBASIC11.8□□□□□ -0.52
Col12a1Q60847 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms